Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920895.1_cds_XP_016469954.1_62450
CDS Infomation

[gene=LOC107792271] [db_xref=GeneID:107792271] [protein=uncharacterized protein LOC107792271] [protein_id=XP_016469954.1] [location=complement(join(163230..164013,164899..164990,165076..165294,165932..166789))] [gbkey=CDS]
Sequence

ATGAAAATCATGGCGTCTTTGAAATCTGGGGTTCTTGTAAGGTTTCTTGAAGATATGAAA
ATGGGTGGTCATCCCTCAGAGGATGATCGAAAGCCCAACTTGTTGCAAATCACAAGTATA
ATTCCTGTTCTTGAAGAAGGCGATCATCTTTGGCCTAACAGAGGATTTTACCTTAAAGTT
TCAGATATTTCACATGCAATGTACGTTTCGTTGCCTGAAGAGCAAAATGAGATGATTCTT
GCAAACAAACTGAAACTGGGGCAATTCATATATGTGCAGAAATTGGAGGATGCTCACCCT
TTCCCATTGCTCAGAGGCGTAACGCCTCTCCCCGGTAGGCGTCCATGTGTTGGAACCCCT
CAAGATATTGTTTCTTTTTCAAATTTTATGAAGATTCTTGACGCATCTAATTCTGATTGC
ATTGTTGAAAAGGGTGTCATTTCTGAGAACAGGATTATTCCATCCAATTCAAGAAAGTTA
TGTCGCGGATTATCTGATCCTGAGGGGTTGAAGAAGAAAAATGATGCTTTGGAGGGAAAA
TCGTCTAAAGGCAAGTTTCGATCATTGAGTGCTTCAAAAGTCCATCCAGGCGAGAAGGTG
ATGGCCCTGGATTGCACTCCTAAAAGATCTGACATTGAGAGGAGAAACTCTCATCTTTTT
CGGGAACTACAAAAGACTAGGAAAAGATCTTTTGATATTCATAGTGATACAGAAAGCATA
TTGTCATCACTCTCATTTTCGTCTCATAACTCCAAGAGAAAAAGTTGGAACGAGTCAGAG
ATTTTGGGAATTAAAGAGATCTTTGATTCTTCAGTTGTTAAACACGATATCAGACCACCT
CGTAGTCGTAGTGCAACTGTTTCACCAGTTCGTTCTGTAAGGTATGATAGCTCGGATGAA
AATTCAAGTTCAATACCAAGAAGAAGAGAAGTTGGTTCTGCAAAGAAAATGAAGAGTTCC
ACTAATAGCAAAACTTCTTTCTCCAAGATAAATACAAATTTAGCTAATGACAGACGAGGG
GCAGAAACTGGTATATCATGGGACGCACTCCCCTCGAGCTTGGTGAAGCTTGGAAAGGAG
GTTGTAAAGCAAAGAGACATTGCTCTTCTTGCAGCTACTGATGCTTTGCAAGAAGCTTGT
GCAGCTGAGAGGTTGCTCAATTCCCTGAGCAAATTTTCAGAGTTCCACTTAGCTGAAGAA
GATGATCTCCAGCCTCATGTTGATAAATTTTTTGACCTTCAAGATGACATGGCTCAGACA
AGATTGGTATTGCAGTCACTGACAAACATAAGTCCACTTAGAACTTCAGGAGAAGCTGAC
ACCAATTCAGTTAAGGAAGCATTGACTATTGCAGTTGAGAGAAAGAAAAATGCATCTATG
TGGGTAAAATCTGCTGTGGCTCTTGATCTTTCACCATGCTCCACTGCCCTCAATCCAATC
CATAATAACACTATGGCTGTCACCAATATGATGAAGCAGTCAAGCACATCAAGTCGAATA
AGTACCAAACCGAAAGGGTCATATATCATTAAATCACATAGGAACAGTACCGATGAGATT
CCTTTCTTATTGTCATCTGACAAAGATGAGCAACCTGATCAATGGACTAGGGGAATCACA
ACACCTGCAGCCACTGTCCTAGCTTCTTCGTTGCAGGACGAGTGTAGAAAATTGTTTTTG
GGACATGTAGAGAAATACCTAGATGAGGTTGAAAGAAAAGCCTCTTCAATGGTATTAGAT
AGCCAAATAGCAGGAATGATGTACAAGGTGAAGAGAGTCAATGATTGGTTAGATGTGATT
ATCAATAAGGAGGCGAATGCTCCAAAGGACGGCGGGAACTTGGATGATTCAGAAATTGAA
GTTTGTCAAAGGGTGAGAAACAAAATATATGGGATCTTACTGAAGCATGTTGAGAGAACT
GCTATGGCTTTTGGAAGTTGCAATTCCACTTAA

Peptide Sequence

PEP ID

XP_016469954.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107792271 [Nicotiana tabacum]
Sequence

MKIMASLKSGVLVRFLEDMKMGGHPSEDDRKPNLLQITSIIPVLEEGDHLWPNRGFYLKV
SDISHAMYVSLPEEQNEMILANKLKLGQFIYVQKLEDAHPFPLLRGVTPLPGRRPCVGTP
QDIVSFSNFMKILDASNSDCIVEKGVISENRIIPSNSRKLCRGLSDPEGLKKKNDALEGK
SSKGKFRSLSASKVHPGEKVMALDCTPKRSDIERRNSHLFRELQKTRKRSFDIHSDTESI
LSSLSFSSHNSKRKSWNESEILGIKEIFDSSVVKHDIRPPRSRSATVSPVRSVRYDSSDE
NSSSIPRRREVGSAKKMKSSTNSKTSFSKINTNLANDRRGAETGISWDALPSSLVKLGKE
VVKQRDIALLAATDALQEACAAERLLNSLSKFSEFHLAEEDDLQPHVDKFFDLQDDMAQT
RLVLQSLTNISPLRTSGEADTNSVKEALTIAVERKKNASMWVKSAVALDLSPCSTALNPI
HNNTMAVTNMMKQSSTSSRISTKPKGSYIIKSHRNSTDEIPFLLSSDKDEQPDQWTRGIT
TPAATVLASSLQDECRKLFLGHVEKYLDEVERKASSMVLDSQIAGMMYKVKRVNDWLDVI
INKEANAPKDGGNLDDSEIEVCQRVRNKIYGILLKHVERTAMAFGSCNST

Transcript Sequence

Gene sequence data has not been registered.